Package: netcutter
Type: Package
Title: Identification and Analysis of Co-Occurrence Networks
Version: 0.3.1
Authors@R: c(
    person("Heiko", "Müller", role = "aut"),
    person("Francesco", "Mancuso", role = "aut"),
    person("Federico", "Marotta", email = "federico.marotta@embl.de", role = "cre"))
Maintainer: Federico Marotta <federico.marotta@embl.de>
Description: Implementation of the NetCutter algorithm described in
        Müller and Mancuso (2008) <doi:10.1371/journal.pone.0003178>.
        The package identifies co-occurring terms in a list of
        containers. For example, it may be used to detect genes that
        co-occur across genomes.
URL: https://doi.org/10.1371/journal.pone.0003178
BugReports: https://github.com/fmarotta/netcutter/issues
License: MIT + file LICENSE
Encoding: UTF-8
Imports: PoissonBinomial, rlecuyer,
Suggests: knitr, rmarkdown, qpdf, testthat (>= 3.0.0)
Config/testthat/edition: 3
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Config/pak/sysreqs: libfftw3-dev
Repository: https://fmarotta.r-universe.dev
Date/Publication: 2025-05-30 11:39:34 UTC
RemoteUrl: https://github.com/fmarotta/netcutter
RemoteRef: HEAD
RemoteSha: 1a2027310a9e093d8c982b0a5d8f4014850434a7
NeedsCompilation: no
Packaged: 2026-10-14 09:39:55 UTC; root
Author: Heiko Müller [aut],
  Francesco Mancuso [aut],
  Federico Marotta [cre]